Information for 11-ACGGTGCCCTCA (Motif 20)

C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G A C T G A T G C C G T A A G T C A G T C A C T G A C G T
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.975
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets118.4 +/- 56.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACGGTGCCCTCA
---CTGCCCGCA
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ACGGTGCCCTCA
----TGACCTYA
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACGGTGCCCTCA
---ATGCCCACC
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACGGTGCCCTCA-
-CGGTGACGTCAC
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACGGTGCCCTCA-
-NGRTGACGTCAY
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACGGTGCCCTCA--
---GTACCCGCATN
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACGGTGCCCTCA
---GTGACCTT-
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACGGTGCCCTCA----
ACGATGACGTCATCGA
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACGGTGCCCTCA-
-NRRTGACGTCAT
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACGGTGCCCTCA----
NCGATGACGTCATCGN
 C G T A A G T C A C T G A C T G A C G T A T C G A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G