Information for 9-CGTAGGTGGA (Motif 13)

A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A G T C A T G C A C G T C G T A A G T C A C T G
p-value:1e-17
log p-value:-3.936e+01
Information Content per bp:1.975
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.5 +/- 50.9bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CGTAGGTGGA-
-----GTGGAT
 A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGTAGGTGGA
NGCGTGGGCGGR
 A C G T A C G T A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGTAGGTGGA-
-GGAGGGGGAA
 A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

ZEB1/MA0103.3/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGTAGGTGGA
NNGCAGGTGNN
 A C G T A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGTAGGTGGA--
CGTGGGTGGTCC
 A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTAGGTGGA---
TCGCGAAGGTTGTACT
 A C G T A C G T A C G T A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTAGGTGGA-
SDGCAGGTGCNS
 A C G T A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTAGGTGGA
NNCAGGTGNN
 A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTAGGTGGA
TGCGTGGGCGT-
 A C G T A C G T A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGTAGGTGGA----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A G T C A C T G A C G T C G T A A T C G A C T G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G