p-value: | 1e-3 |
log p-value: | -7.977e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 0.47% |
Number of Background Sequences with motif | 85.8 |
Percentage of Background Sequences with motif | 0.19% |
Average Position of motif in Targets | 110.0 +/- 40.6bp |
Average Position of motif in Background | 111.5 +/- 56.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.22 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0040.1_Hmbox1/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GACTAGTT------ GAAAACTAGTTAACATC |
|
|
|
HMBOX1/MA0895.1/Jaspar
Match Rank: | 2 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GACTAGTT--- -ACTAGTTAAC |
|
|
|
PH0168.1_Hnf1b/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GACTAGTT------- ANNNCTAGTTAACNGNN |
|
|
|
GRHL2/MA1105.1/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GACTAGTT---- NNAAACTGGTTTGNC |
|
|
|
LBX1/MA0618.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GACTAGTT-- --CTAATTAA |
|
|
|
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GACTAGTT-- ACCGTGACTAATTNN |
|
|
|
PH0107.1_Msx2/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GACTAGTT------ GAAGACCAATTAGCGCT |
|
|
|
PH0033.1_Gbx1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GACTAGTT------ TGCCACTAATTAGTGTA |
|
|
|
PH0092.1_Lhx2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GACTAGTT------- TAAACTAATTAGTGAAC |
|
|
|
LHX2/MA0700.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GACTAGTT--- -ACTAATTAAC |
|
|
|