Information for 6-NCGACTTAGCTN (Motif 10)

A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A
Reverse Opposite:
G C A T C G T A T C A G A G T C A G C T T C G A C T G A T A C G C G A T T A G C A T C G T A C G
p-value:1e-36
log p-value:-8.417e+01
Information Content per bp:1.446
Number of Target Sequences with motif4274.0
Percentage of Target Sequences with motif72.15%
Number of Background Sequences with motif28025.3
Percentage of Background Sequences with motif64.38%
Average Position of motif in Targets373.0 +/- 211.4bp
Average Position of motif in Background377.1 +/- 220.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:NCGACTTAGCTN
ACCACTTAA---
A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:NCGACTTAGCTN
ACCACTTAA---
A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:NCGACTTAGCTN-
--TTCTTATCTTT
A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A A C G T
A C G T A C G T C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----NCGACTTAGCTN-
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C G T A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:NCGACTTAGCTN
-NNACTTACCTN
A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

BACH2/MA1101.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-NCGACTTAGCTN-
GATGACTCAGCAAT
A C G T A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A A C G T
T A C G T G C A G A C T C A T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A C T G A G C A T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----NCGACTTAGCTN-
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0032.1_Evx2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---NCGACTTAGCTN--
ANCGCTAATTAGCGGTN
A C G T A C G T A C G T A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:NCGACTTAGCTN
--NCCTTATCTG
A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A
A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---NCGACTTAGCTN--
ACCCCTAATTAGCGGTG
A C G T A C G T A C G T A T G C T A G C A T C G G C T A A T G C G A C T A G C T T C G A T C A G A G T C G C A T C G T A A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G