Information for 6-AAAGSCTKTC (Motif 6)

G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C
Reverse Opposite:
C T A G G T C A T G C A T G C A A C T G T A G C A T G C G C A T C A G T C G A T
p-value:1e-68
log p-value:-1.572e+02
Information Content per bp:1.595
Number of Target Sequences with motif2713.0
Percentage of Target Sequences with motif34.56%
Number of Background Sequences with motif10574.7
Percentage of Background Sequences with motif25.63%
Average Position of motif in Targets374.6 +/- 209.9bp
Average Position of motif in Background372.0 +/- 222.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGSCTKTC-----
AAGCACCTGTCAATAT
 A C G T G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Tcf21/MA0832.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAAGSCTKTC--
NCAACAGCTGTTGC
 A C G T A C G T G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C A C G T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

MSC/MA0665.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAGSCTKTC
AACAGCTGTT
 G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C
T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

MYF6/MA0667.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAGSCTKTC
AACAGCTGTT
 G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGSCTKTC-----
AATTACCTGTCAATAC
 A C G T G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAGSCTKTC
----GCTGTG
 G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAAGSCTKTC--
----GCTGTCAA
 G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAGSCTKTC-----
AAAACCTGGANHGGR
 G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAAGSCTKTC
RACAAWGG-----
 A C G T A C G T A C G T G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGSCTKTC
ASATCAAAGG-----
 A C G T A C G T A C G T A C G T A C G T G C T A G T C A C G T A T A C G A T C G G T A C A C G T A C G T A C G T G A T C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T A C G T