Information for 7-CCNCCTGAGRTS (Motif 14)

A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
Reverse Opposite:
A T C G C T G A A G C T A G T C A C G T G T A C C T G A A C T G A T C G A G T C C T A G T C A G
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.656
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.1 +/- 58.8bp
Average Position of motif in Background26.3 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)3.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCNCCTGAGRTS
CCTGCTGAGH--
 A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCNCCTGAGRTS
CCCCCTGCTGTG---
 A C G T A C G T A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCNCCTGAGRTS
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCNCCTGAGRTS
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCNCCTGAGRTS
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCNCCTGAGRTS
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCNCCTGAGRTS
NNCACCTGNN---
 A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCNCCTGAGRTS
CCCACCTGCGC--
 A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCNCCTGAGRTS--
ATTGCCTGAGGCAAT
 A C G T A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCNCCTGAGRTS
-TGCCTGAGGCN
 A G T C A G T C T C A G A T G C T A G C G A C T A C T G T C G A C T A G C T G A A G C T A T G C
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T