Information for 9-ACGACCTAAT (Motif 18)

C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C T G A C T G A C G T A G T C A C T G A C G T
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.968
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets105.6 +/- 57.4bp
Average Position of motif in Background85.5 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORB/MA1150.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACGACCTAAT-
NTGACCTAATT
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T A C G T
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T

RORC/MA1151.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACGACCTAAT---
-TGACCTANTTAN
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------ACGACCTAAT
GNNNTTTTACGACCTNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACGACCTAAT-
-TGACCTARTT
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACGACCTAAT-
-TGACCTARTT
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACGACCTAAT--
BTGACCTAVTTW
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T A C G T A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

FOSL2::JUN(var.2)/MA1131.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACGACCTAAT
GATGACGTCAT
 A C G T C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T
C A T G T C G A A C G T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACGACCTAAT--------
-CGACCCAATCAACGGTG
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACGACCTAAT----
TTGACCTANTTATN
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACGACCTAAT
ATGACGTAAC
 C G T A A G T C A C T G C G T A A G T C G T A C A C G T C G T A C G T A A C G T
T C G A A G C T A T C G G T C A A G T C C A T G G A C T T G C A C G T A G A T C