Information for 9-ATGTAATAATAT (Motif 19)

C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.5 +/- 66.1bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--ATGTAATAATAT
TTATGTACTAATAA
 A C G T A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGTAATAATAT---
TAGGTAATAAAATTCA
 A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATGTAATAATAT-
TCTTTANTAATANN
 A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATGTAATAATAT----
AATGCAATAAAATTTAT
 A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATGTAATAATAT
--GTCATAAAAN
 C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATGTAATAATAT--
TAAGGTAATAAAATTA
 A C G T A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGTAATAATAT--
AAAGGTAATAAAATTT
 A C G T A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATGTAATAATAT
-GGTAATAAAAA
 C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T
A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATGTAATAATAT
----AATAATT-
 C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGTAATAATAT
--GCAATAAAA-
 C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T