Information for 13-GGCGTTGA (Motif 27)

A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A G T C A C T G G T A C A G T C
p-value:1e-4
log p-value:-1.140e+01
Information Content per bp:1.925
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif490.7
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets109.9 +/- 55.8bp
Average Position of motif in Background106.9 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGCGTTGA-
TGACCTTGAN
 A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GGCGTTGA----
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGCGTTGA-
TGACCTTGAV
 A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCGTTGA----
GAGGTCATTGACCCC
 A C G T A C G T A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A G C T A G T C T C G A C G A T A G C T T A C G T G C A G T A C G T A C A G T C A G T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCGTTGA---
TGACCTTGACCT
 A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGCGTTGA
BNTGDCCTTG-
 A C G T A C G T A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCGTTGA---
-CCTTTGATGT
 A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCGTTGA---
TGACCTTGACCT
 A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGCGTTGA
NATGACCTTGA
 A C G T A C G T A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCGTTGA-
ATGACCTTGAA
 A C G T A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C T G C G T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A