Information for 17-CTGRSGTCTCYC (Motif 29)

A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C
Reverse Opposite:
A T C G T C A G A C T G C T G A C A T G T G C A G T A C A T G C G A T C A G T C C T G A A C T G
p-value:1e-3
log p-value:-9.178e+00
Information Content per bp:1.642
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif566.8
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets89.5 +/- 56.8bp
Average Position of motif in Background99.7 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGRSGTCTCYC-
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGRSGTCTCYC--
--GGGGATTCCCCC
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGRSGTCTCYC-
GTCWGCTGTYYCTCT
 A C G T A C G T A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGRSGTCTCYC----
TTGGGGGCGCCCCTAG
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGRSGTCTCYC
--CNGTCCTCCC
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGRSGTCTCYC--
-AGGGGATTCCCCT
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T A C G T
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGRSGTCTCYC------
---ACCACTCTCGGTCAC
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGRSGTCTCYC--
-AGGGGAATCCCCT
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CTGRSGTCTCYC--
--------TCCCCA
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTGRSGTCTCYC
------GCTCCG
 A G T C G A C T C T A G C T A G T A C G C A T G A C G T G T A C A G C T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G