Information for 4-GACAAGTC (Motif 3)

C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C
Reverse Opposite:
T C A G C T G A A G T C A C G T A C G T A C T G A G C T G A T C
p-value:1e-63
log p-value:-1.473e+02
Information Content per bp:1.849
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif17.65%
Number of Background Sequences with motif1507.7
Percentage of Background Sequences with motif3.15%
Average Position of motif in Targets99.3 +/- 40.3bp
Average Position of motif in Background98.8 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GACAAGTC-
AAGGCAAGTGT
 A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GACAAGTC--
-AAAAGTCAA
 C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C A C G T A C G T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

XBP1/MA0844.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GACAAGTC---
AATGCCACGTCATC
 A C G T A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C A C G T A C G T A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GACAAGTC
NNTGCCAAGNN
 A C G T A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GACAAGTC-
TAACGACACGTGC
 A C G T A C G T A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GACAAGTC---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACAAGTC----
GTGCCACGTCATCA
 A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C A C G T A C G T A C G T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAAGTC
TTGACAG---
 A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAAGTC
TTGACAGG--
 A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GACAAGTC
RHTGWCAR---
 A C G T A C G T A C G T C T A G C T G A A G T C G T C A T G C A A C T G G A C T A G T C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T