Information for 22-CCCTATGTAA (Motif 42)

A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G A C T G
p-value:1e-1
log p-value:-3.363e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.0 +/- 54.7bp
Average Position of motif in Background96.0 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CCCTATGTAA---
--TTATGTAACAT
 A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCTATGTAA
CCATATGT--
 A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCTATGTAA
ACCATATGTT-
 A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CCCTATGTAA-
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCTATGTAA-
-RTTATGYAAB
 A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCTATGTAA
ACCATATGGT-
 A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCCTATGTAA---
-NCTAAGTAAACA
 A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCCTATGTAA--
---TATGCAAAT
 A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCCTATGTAA----
---TATGTAAATAT
 A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

NEUROD2/MA0668.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTATGTAA
GCCATATGGT-
 A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T C G T A C G T A
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T