Information for 23-GTGTCGAT (Motif 43)

A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T A G T C A T C G C G T A A G T C C T G A A G T C
p-value:1e-1
log p-value:-2.870e+00
Information Content per bp:1.872
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif956.8
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets98.1 +/- 55.5bp
Average Position of motif in Background99.8 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)2.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0035.1_Irf5_1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCGAT----
NTGGTTTCGGTTNNN
 A C G T A C G T A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------GTGTCGAT---
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGTCGAT----
-TGTGGATTNNN
 A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GTGTCGAT---
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTGTCGAT
--GTGGAT
 A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GTGTCGAT--
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTGTCGAT---
NNTGTGGATTSS
 A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGTCGAT------
TCCGTCGCTTAAAAG
 A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGTCGAT-
TGCGTGGGYG
 A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCGAT----
TNAGTTTCGATTTTN
 A C G T A C G T A C G T A C T G A G C T A C T G A C G T A T G C A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G