Information for 10-CGCAAGTTCTTC (Motif 10)

A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C
Reverse Opposite:
A C T G G T C A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G A G T C A T C G
p-value:1e-19
log p-value:-4.391e+01
Information Content per bp:1.901
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets125.6 +/- 65.1bp
Average Position of motif in Background35.6 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCAAGTTCTTC
AAGGCAAGTGT---
 A C G T A C G T A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCAAGTTCTTC---
CTTTAAGTACTTAATG
 A C G T A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCAAGTTCTTC
-TTAAGTGCTT-
 A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CGCAAGTTCTTC-
-------GCTTCC
 A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

POL005.1_DPE/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGCAAGTTCTTC
--GAAGATGTT-
 A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C
A C G T A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCAAGTTCTTC
AACCGGAAGT-----
 A C G T A C G T A C G T A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCAAGTTCTTC----
TTCNAAGTACTTNNNNN
 A C G T A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

ETV6/MA0645.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCAAGTTCTTC
AGCGGAAGTG----
 A C G T A C G T A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGCAAGTTCTTC
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGCAAGTTCTTC---
TATTCAAGGTCATGCGA
 A C G T A C G T A T G C C T A G G T A C C G T A C G T A A C T G A C G T A C G T G T A C A C G T A C G T A G T C A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A