Information for 13-GAGGGGTCCAAG (Motif 12)

A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A T G C
p-value:1e-17
log p-value:-4.084e+01
Information Content per bp:1.959
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets130.7 +/- 61.8bp
Average Position of motif in Background144.4 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGGTCCAAG
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GAGGGGTCCAAG--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGGGGTCCAAG--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGGGGTCCAAG----
--GGGGTCAAAGGTCA
 A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGGGGTCCAAG------
--GGGGTCAAAGTCCAAT
 A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAGGGGTCCAAG----
--GGGGTCAAAGGTCA
 A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAGGGGTCCAAG----
--GGGGTCAAAGGTCA
 A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGTCCAAG--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGGGGTCCAAG
NRRGGGTCTT--
 A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGGGTCCAAG----
-AGGGGTCAGAGGTCA
 A T C G C G T A A C T G C T A G A C T G A C T G A C G T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A