Information for 14-CCCCCTTGTCAA (Motif 14)

A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
Reverse Opposite:
A G C T C G A T A C T G C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G
p-value:1e-15
log p-value:-3.663e+01
Information Content per bp:1.940
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.6 +/- 35.7bp
Average Position of motif in Background68.0 +/- 45.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCCCCTTGTCAA--
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCCCCTTGTCAA
--CCTTTGTT--
 A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCCCCTTGTCAA
--CCWTTGTY--
 A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CCCCCTTGTCAA
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCCCCTTGTCAA
-----NTGTCAN
 A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCCCTTGTCAA---
GAGCCCTTGTCCCTAA
 A C G T A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCCCCTTGTCAA
----CCTGTCAA
 A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCCCCTTGTCAA
-NCCATTGTTC-
 A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCCCTTGTCAA
--CCWTTGTYYB
 A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCTTGTCAA
TTCCCCCTAC----
 A C G T A C G T A G T C A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A C T G A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T