Information for 8-GGCCTATT (Motif 15)

C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T
Reverse Opposite:
C T G A C T G A A G C T C T G A C A T G A T C G T A G C A G T C
p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.806
Number of Target Sequences with motif319.0
Percentage of Target Sequences with motif7.96%
Number of Background Sequences with motif2304.9
Percentage of Background Sequences with motif5.13%
Average Position of motif in Targets102.1 +/- 55.4bp
Average Position of motif in Background102.2 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGCCTATT
AGGCCTAG-
 A C G T C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTATT
CNAGGCCT---
 A C G T A C G T A C G T C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTATT
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGCCTATT-----
---CTATTTTTGG
 C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

RORC/MA1151.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTATT---
TGACCTANTTAN
 A C G T C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T A C G T A C G T A C G T
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTATT-
KGGCCYCWTD
 A C G T C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGCCTATT--
NNHYTGACCTAGWTT
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCCTATT------
--KCTATTTTTRGH
 C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTATT--
BTGACCTAVTTW
 A C G T A C G T C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T A C G T A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCCTATT------
--GCTATTTTTGGM
 C T A G A T C G T A G C G T A C A G C T T C G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C