Information for 11-TTCGCACT (Motif 18)

C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T
Reverse Opposite:
C G T A T C A G C G A T C T A G A T G C T A C G G T C A G C T A
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.798
Number of Target Sequences with motif232.0
Percentage of Target Sequences with motif5.79%
Number of Background Sequences with motif1704.1
Percentage of Background Sequences with motif3.80%
Average Position of motif in Targets96.5 +/- 55.8bp
Average Position of motif in Background99.3 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCACT
NNTTGGCANN
 A C G T A C G T C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTCGCACT
TACTTGGCAGA
 A C G T A C G T A C G T C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCGCACT
NTTGGCANN
 A C G T C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCGCACT--
TTMACACCTT
 C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T A C G T A C G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

RBPJ/MA1116.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCACT
NNTTCCCANN
 A C G T A C G T C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCACT
GGTTGGCAT-
 A C G T A C G T C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTCGCACT--
TTVACACCTH
 C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T A C G T A C G T
A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTCGCACT----
---CCACTTGAA
 C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTCGCACT
HTTTCCCASG
 A C G T A C G T C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTCGCACT-
ATTAACACCT
 A C G T C G A T C A G T A T G C A T C G G A T C C G T A A G T C A C G T A C G T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T