Information for 17-CTGATCKA (Motif 31)

A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A
Reverse Opposite:
A G C T G T A C A C T G C G T A A C G T A G T C C G T A A T C G
p-value:1e-3
log p-value:-7.676e+00
Information Content per bp:1.898
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif530.5
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets100.5 +/- 58.0bp
Average Position of motif in Background102.1 +/- 54.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX1/MA0754.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CTGATCKA---
-TAATCGATAA
A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T A C G T A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTGATCKA---
-TAATCGATAA
A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T A C G T A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTGATCKA---
-DGATCRATAN
A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T A C G T A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGATCKA--
NTNATCGATA
A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T A C G T
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGATCKA----
RTGATTKATRGN
A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T A C G T A C G T A C G T
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTGATCKA
TCTTATCT-
A C G T A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A
A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTGATCKA---
-TGATKGATGR
A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T A C G T A C G T
A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

GATA3/MA0037.3/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGATCKA
TCTTATCT-
A C G T A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A
A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGATCKA-
YCTTATCWVN
A C G T A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T
A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

PB0023.1_Gata6_1/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CTGATCKA----
NNANTCTTATCTNNNNN
A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G C G T A A C G T A G T C A C T G C T G A A C G T A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A