Information for 22-CACGTWACGT (Motif 33)

A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
Reverse Opposite:
C T G A A G T C A C T G A G C T G C T A C T G A A T G C A C T G C G A T A C T G
p-value:1e-2
log p-value:-4.788e+00
Information Content per bp:1.828
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif45.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets98.1 +/- 60.6bp
Average Position of motif in Background75.2 +/- 49.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CACGTWACGT
NCACGTGACN-
 A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

USF2/MA0526.2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CACGTWACGT--
NNGCCACGTGACCNNN
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T A C G T A C G T
A C T G T C A G T C A G G A T C T G A C C T G A A G T C T C A G A G C T A T C G C T G A A G T C G A T C G A T C T A G C T A C G

BHLHE41/MA0636.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CACGTWACGT
GTCACGTGAC--
 A C G T A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACGTWACGT
TCACGTGACC-
 A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CACGTWACGT
GTGCCACGCGACTG
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

TFEB/MA0692.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CACGTWACGT
ATCACGTGAC--
 A C G T A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

TFE3/MA0831.2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CACGTWACGT
CACGTGAC--
 A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGTWACGT
ATCACGTGAC--
 A C G T A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CACGTWACGT
CACGTGDC--
 A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACGTWACGT
KCACGTGMCN-
 A C G T A G T C C G T A G T A C A T C G G A C T C G A T C T G A A G T C A C T G A G C T
C A T G T G A C C G T A A G T C T A C G G C A T A C T G G T C A A T G C A G T C A C G T