Information for 7-TTTATAATCTTT (Motif 7)

A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A A C T G G T C A A C G T A C G T C G T A A C G T C G T A C G T A C G T A
p-value:1e-25
log p-value:-5.844e+01
Information Content per bp:1.975
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets140.5 +/- 57.0bp
Average Position of motif in Background78.1 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAATCTTT
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTTATAATCTTT
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PH0012.1_Cdx1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAATCTTT
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAATCTTT
NNTAATTATAATNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTATAATCTTT
DGWTTTATGRCN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAATCTTT
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTTATAATCTTT
GCTAATTATAATTATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATAATCTTT
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATAATCTTT
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTATAATCTTT
---TTAATCCT-
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T