Information for 12-GCAGGGTTTA (Motif 11)

T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A
Reverse Opposite:
C G A T C T G A C G T A C G T A A T G C G A T C T A G C G C A T A C T G A T G C
p-value:1e-35
log p-value:-8.224e+01
Information Content per bp:1.649
Number of Target Sequences with motif1296.0
Percentage of Target Sequences with motif21.88%
Number of Background Sequences with motif6816.2
Percentage of Background Sequences with motif15.66%
Average Position of motif in Targets380.7 +/- 208.7bp
Average Position of motif in Background374.3 +/- 216.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCAGGGTTTA
--NGGGATTA
 T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCAGGGTTTA--
---GGGATTANN
 T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGGTTTA
NMMNBAAAGGGTTAA
 A C G T A C G T A C G T A C G T A C G T T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGTTTA------
TGTAGGGATTAATTGTC
 A C G T T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GCAGGGTTTA
YCCDNTCCAGGTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCAGGGTTTA--
--VRGGATTARN
 T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A A C G T A C G T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGTTTA------
AGAGGGGATTAATTTAT
 A C G T T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGTTTA------
NANAGGGATTAATTATN
 A C G T T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCAGGGTTTA-----
TTAGAGGGATTAACAAT
 A C G T A C G T T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0124.1_Obox5_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGTTTA------
TAGAGGGATTAAATTTC
 A C G T T A C G T G A C C G T A A T C G C T A G T A C G G C A T G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C