Information for 18-GCTTAGTA (Motif 17)

C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
Reverse Opposite:
C G A T G T C A T A G C C G A T C G T A C T G A C T A G G A T C
p-value:1e-29
log p-value:-6.820e+01
Information Content per bp:1.788
Number of Target Sequences with motif3311.0
Percentage of Target Sequences with motif55.89%
Number of Background Sequences with motif21107.4
Percentage of Background Sequences with motif48.49%
Average Position of motif in Targets375.2 +/- 216.8bp
Average Position of motif in Background374.7 +/- 219.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAGTA
GGATTAGC-
 A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCTTAGTA
AAGAGGATTAG--
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCTTAGTA
RGGATTAR--
 A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAGTA
GGGATTANN-
 A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAGTA
CGGATTAN--
 A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTTAGTA
NNGGATTAGN-
 A C G T A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTTAGTA
GNGGATTAGN-
 A C G T A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTTAGTA
NGGGATTA---
 A C G T A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAGTA
GGGATTAA--
 A C G T A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAGTA--
NNCTTTGTTNN
 A C G T C T A G G A T C A G C T A C G T C G T A A T C G C A G T G C T A A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T