Information for 18-CWTTGTTTCC (Motif 19)

G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
Reverse Opposite:
C T A G T A C G C T G A G C T A G C T A A T G C G T C A C T G A C G A T C T A G
p-value:1e-27
log p-value:-6.272e+01
Information Content per bp:1.536
Number of Target Sequences with motif533.0
Percentage of Target Sequences with motif9.00%
Number of Background Sequences with motif2388.8
Percentage of Background Sequences with motif5.49%
Average Position of motif in Targets363.8 +/- 205.0bp
Average Position of motif in Background373.8 +/- 222.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CWTTGTTTCC
CCATTGTTTT-
 A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTCC
NCCATTGTTY--
 A C G T A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CWTTGTTTCC
CCATTGTTYB-
 A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----CWTTGTTTCC--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----CWTTGTTTCC--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CWTTGTTTCC
CCWTTGTYYB-
 A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CWTTGTTTCC
YCTTTGTTCC-
 A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CWTTGTTTCC
CCTTTGTTTT-
 A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTCC
NNCTTTGTTNN-
 A C G T A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CWTTGTTTCC
CTATTGTTTT-
 A C G T G A T C G C T A G A C T C A G T T A C G C G A T C G A T G A C T A T G C G A T C
A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T A C G T