Information for 14-NGAGTCTGAACN (Motif 20)

C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C
Reverse Opposite:
C T A G T C A G A G C T A G C T T G A C C G T A T A C G C G T A G T A C G C A T A G T C G C A T
p-value:1e-20
log p-value:-4.648e+01
Information Content per bp:1.446
Number of Target Sequences with motif4241.0
Percentage of Target Sequences with motif71.59%
Number of Background Sequences with motif28700.8
Percentage of Background Sequences with motif65.94%
Average Position of motif in Targets379.4 +/- 212.6bp
Average Position of motif in Background375.1 +/- 217.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:NGAGTCTGAACN
-TWGTCTGV---
 C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:NGAGTCTGAACN--
------TGAACTCA
 C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:NGAGTCTGAACN
-GAGSCCGAGC-
 C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------NGAGTCTGAACN
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:NGAGTCTGAACN
-NNNANTGA---
 C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-NGAGTCTGAACN
VBSYGTCTGG---
 A C G T C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:NGAGTCTGAACN
-CTGTCTGG---
 C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:NGAGTCTGAACN---
-----TTGAMCTTTG
 C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---NGAGTCTGAACN--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---NGAGTCTGAACN--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T C G T A T C A G C G T A C A T G G C A T A T G C G C A T A C T G T C G A T C G A A G T C G A T C A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T