Information for 22-CTTACAGGCATA (Motif 28)

A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A
Reverse Opposite:
A G C T C G T A A C G T A C T G A G T C A G T C A C G T C T A G A C G T C G T A C G T A A C T G
p-value:1e-11
log p-value:-2.677e+01
Information Content per bp:1.913
Number of Target Sequences with motif3478.0
Percentage of Target Sequences with motif58.71%
Number of Background Sequences with motif23610.8
Percentage of Background Sequences with motif54.24%
Average Position of motif in Targets378.4 +/- 214.0bp
Average Position of motif in Background375.9 +/- 216.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU1F1/MA0784.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTACAGGCATA--
CTAATTTGCATATT
 A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTACAGGCATA---
TNTAATTTGCATANNN
 A C G T A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTACAGGCATA
CTTCCNGGAA--
 A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTACAGGCATA---
TNTAATTTGCATACNA
 A C G T A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTACAGGCATA---
TNTAATTTGCATACNA
 A C G T A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTACAGGCATA
--TACCCGCATN
 A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A
A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTACAGGCATA
-GTACCCGCATN
 A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTTACAGGCATA
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTTACAGGCATA
---ATTTGCATA
 A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTACAGGCATA
CTCATTTGCATW
 A G T C A C G T A C G T C G T A A G T C G T C A A C T G A C T G A G T C C G T A A C G T C T G A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A