p-value: | 1e-44 |
log p-value: | -1.016e+02 |
Information Content per bp: | 1.690 |
Number of Target Sequences with motif | 1754.0 |
Percentage of Target Sequences with motif | 29.61% |
Number of Background Sequences with motif | 9492.0 |
Percentage of Background Sequences with motif | 21.81% |
Average Position of motif in Targets | 370.7 +/- 212.9bp |
Average Position of motif in Background | 379.0 +/- 216.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.21 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0060.1_Smad3_1/Jaspar
Match Rank: | 1 |
Score: | 0.89 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGTCTGGNWA-- NNTNNTGTCTGGNNTNG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.86 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTGGNWA CTGTCTGG--- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.84 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGTCTGGNWA VBSYGTCTGG--- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 4 |
Score: | 0.81 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTCTGGNWA GGTCTGGCAT |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.80 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTGGNWA TWGTCTGV--- |
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Smad4/MA1153.1/Jaspar
Match Rank: | 6 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTCTGGNWA TGTCTAGA-- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTCTGGNWA WDNCTGGGCA |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCTGGNWA-- TGTCTGDCACCT |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTGGNWA-- CTGTCTGTCACCT |
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Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 10 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTCTGGNWA------ -GYCTGGYYTNTGTCA |
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