Information for 11-AGAAATCCGG (Motif 9)

T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G
Reverse Opposite:
A G T C T G A C C T A G C A T G G T C A C A G T A C G T G A C T G T A C A G C T
p-value:1e-37
log p-value:-8.662e+01
Information Content per bp:1.649
Number of Target Sequences with motif2478.0
Percentage of Target Sequences with motif41.83%
Number of Background Sequences with motif14698.4
Percentage of Background Sequences with motif33.77%
Average Position of motif in Targets378.3 +/- 211.9bp
Average Position of motif in Background376.6 +/- 222.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGAAATCCGG--
-TACATCCGGGT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T A C G T
A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAAATCCGG------
GTACATCCGGATTTTT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAAATCCGG--
--ACATCCTGNT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T A C G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

ETV5/MA0765.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGAAATCCGG-
-NACTTCCGGT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T
A C G T G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T

ETV4/MA0764.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGAAATCCGG-
-TACTTCCGGT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T
A C G T G A C T T C G A A G T C C G A T G A C T G T A C A T G C A C T G A T C G G A C T

ERG/MA0474.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAAATCCGG-
-NACTTCCGGT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T
A C G T A T G C T C G A A G T C C G A T C A G T T G A C A G T C A C T G A C T G G C A T

FEV/MA0156.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAAATCCGG-
-NACTTCCGGT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T
A C G T G A T C T C G A A G T C C G A T C G A T G T A C G A T C A C T G A C T G G C A T

ETV1/MA0761.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAAATCCGG-
-NACTTCCGGT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T
A C G T G A C T T C G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G G A C T

TFCP2/MA0145.3/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGAAATCCGG---
---AAACCGGTTT
 T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGAAATCCGG--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T T C G A C A T G C T G A T G C A G T C A C A G T G T A C G A T C A C T G T C A G A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T