Information for 10-AMATGCCACTCA (Motif 16)

C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A
Reverse Opposite:
C A G T A T C G C G T A T A C G C G A T C A T G A C T G G A T C G C T A C A G T A C T G G C A T
p-value:1e-39
log p-value:-9.031e+01
Information Content per bp:1.489
Number of Target Sequences with motif4782.0
Percentage of Target Sequences with motif60.91%
Number of Background Sequences with motif22080.9
Percentage of Background Sequences with motif53.53%
Average Position of motif in Targets373.0 +/- 212.5bp
Average Position of motif in Background376.2 +/- 218.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.63
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AMATGCCACTCA--
---AGCCACTCAAG
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AMATGCCACTCA-
-SCTGTCAVTCAV
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AMATGCCACTCA-
-NCTGTCAATCAN
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AMATGCCACTCA---
NNNCCTGTCACTCANNN
 A C G T A C G T C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AMATGCCACTCA-
---AASCACTCAA
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AMATGCCACTCA----
AATTACCTGTCAATAC
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AMATGCCACTCA----
AAGCACCTGTCAATAT
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AMATGCCACTCA
GSCTGTCACTCA
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AMATGCCACTCA-
-----GCTGTCAA
 C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AMATGCCACTCA---
NNNNTGCCAGTGATTG
 A C G T C G T A T G A C G T C A C G A T C T A G T G A C G T A C G C T A A T G C G C A T T A G C G T C A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G