Information for 24-AAGCCGAG (Motif 24)

G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G
Reverse Opposite:
T A G C C G A T G T A C C T A G A C T G A T G C A C G T A C G T
p-value:1e-21
log p-value:-4.999e+01
Information Content per bp:1.758
Number of Target Sequences with motif1033.0
Percentage of Target Sequences with motif13.16%
Number of Background Sequences with motif4026.4
Percentage of Background Sequences with motif9.76%
Average Position of motif in Targets385.6 +/- 213.0bp
Average Position of motif in Background384.0 +/- 235.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGCCGAG-
GTAACCTGATA
 A C G T A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGCCGAG
CAGCC---
 G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGCCGAG-
GAGSCCGAGC
 A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

SIX2/MA1119.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAGCCGAG--
AACTGAAACCTGATAC
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGCCGAG----
TGWAAYCTGABACCB
 A C G T A C G T A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T A C G T A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCGAG-
HCAGCTGDTN
 A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCGAG------
GNNACCGAGAATNNN
 A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGCCGAG--
GWAAYHTGAKMC
 A C G T A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGCCGAG--
GWAAYHTGABMC
 A C G T A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

IRF5/MA1420.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGCCGAG---
CCGAAACCGAAACT
 A C G T A C G T A C G T G T C A C G T A T A C G A G T C A G T C C A T G C G T A A T C G A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T