Information for 4-GCTGATTA (Motif 3)

A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A
Reverse Opposite:
C G A T G C T A T C G A C A G T A G T C G T C A A T C G T G A C
p-value:1e-85
log p-value:-1.980e+02
Information Content per bp:1.595
Number of Target Sequences with motif3595.0
Percentage of Target Sequences with motif45.79%
Number of Background Sequences with motif14429.3
Percentage of Background Sequences with motif34.98%
Average Position of motif in Targets371.4 +/- 210.6bp
Average Position of motif in Background373.6 +/- 221.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX1/MA0887.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GCTGATTA--
GGTAATTAGC
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T A C G T
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GCTGATTA-
-CGGATTAN
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

EVX2/MA0888.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GCTGATTA--
GGTAATTAGC
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T A C G T
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCTGATTA--
GNGGATTAGN
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCTGATTA-
AGCTCATTAT
 A C G T A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCTGATTA--
NNGGATTAGN
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCTGATTA-
-RGGATTAR
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GCTGATTA-
-NGGATTAA
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T
A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GCTGATTA-
-CCAATTAA
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T
A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

LHX6/MA0658.1/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCTGATTA--
NCTAATTAGT
 A C T G T A G C C A G T T C A G G T C A A G C T C G A T G C T A A C G T A C G T
T C A G A G T C G A C T T C G A T C G A A C G T A G C T T C G A T C A G A G C T