Information for 23-GAGATGTCGA (Motif 34)

A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A G T C C G T A A C G T A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets178.1 +/- 93.0bp
Average Position of motif in Background302.6 +/- 334.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GAGATGTCGA---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAGATGTCGA---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

TWIST1/MA1123.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAGATGTCGA
ATTCCAGATGTTT-
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A
C T G A G C A T C G A T T G A C G T A C C G T A A T C G T G C A G A C T A C T G A C G T A C G T G A C T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGATGTCGA---
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGATGTCGA---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

Atf3/MA0605.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGATGTCGA
--GATGACGT
 A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A
A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGATGTCGA---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAGATGTCGA
CATCCAGATGTTC-
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGATGTCGA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PB0108.1_Atf1_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGATGTCGA-----
-GAATGACGAATAAC
 A C T G C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C